In-silico Designing of Immunogenic Construct Based on Peptide Epitopes Using Immuno-informatics Tools Against Tuberculosis
author
Abstract:
Background and Aim: Mycobacterium tuberculosis is a health problem in countries. Despite the global prevalence of tuberculosis and the lack of appropriate drugs, further progress is still needed with the help of modern methods of preparing epitope-based vaccines for tuberculosis. Materials and Methods: In this study, specific T and B cell epitopes required for producing chimeric vaccines with the help of servers such as IEDB were determined. The antigenicity, allergenicity, and toxicity of the selected epitopes by various other servers such as VaxiJenv2.0, AllerTOP, and Toxinpred were determined and the vaccine of the epitope was then configured with the help of special linkers. Then, analyze the structure vaccine by some other bioinformatics servers such as PRABI, SWISS-MODEL, PROCHECK, and PEPCALC, was investigated and finally detected using docking techniques to evaluate the interaction with the epitope through MVD software. Results: The results showed that the vaccine, in terms of in silico evaluations of two-dimensional and three-dimensional structures, has a good condition. Also, the percentage of optimal placement of amino acids and bonds by PROCHECK server, % 99 percent of optimal placement of amino acids in the chimer structure was established. Also, it was non-toxic and nonallergenic and had the desired antigenicity. Conclusion: In general, the vaccine that was able to have a favorable interaction with some components of the immune system (HLA) in the docking process, which indicates the optimal identification of this structure by the humoral and cellular immune system, of course, more reliable proof of it requires clinical phase processes.
similar resources
Designing a Construct of Chimeric Multi-Epitopes Protein for Contraceptive Vaccine in Mice: An Immunoinformatics and In Silico Study
Background: Contraceptive vaccines (CVs) can be used as a valuable and alternative method for the prevention of gestation in humans and animals. These vaccines can have several targets, such as superficial sperm proteins. Vaccines based on sperm antigens are quite efficacious to create a contraceptive effect. However, multi-epitope vaccines are more effective in stimulating the immune system an...
full textAdvances in synthetic peptide immuno-regulatory epitopes
Synthetic peptide immuno-regulatory epitopes (SPIRE) represent a new class of therapeutics for allergen immunotherapy that offer the potential to suppress the IgE-mediated allergic disease process through induction of T-cell tolerance. These synthetic T-cell-tolerizing peptides have been designed to induce immunologic tolerance via binding to MHC class II molecules on antigen presenting cells, ...
full textdesigning a novel multi-epitope dna- based vaccine against tuberculosis: in silico approach
conclusions the results revealed that the novel multi-epitope dna construct could be an effective candidate in tuberculosis vaccine development, and it is qualified to investigate its potential to induce cd4 and cd8 t- cell immune response in the experimental animal model. results mhc class i-and class ii-predicted epitopes showed a high potential to binding to human hlas alleles, with global b...
full textthe effect of using critical discourse analytical tools on the improvement of the learners level of critical thinking in reading comprehension
?it is of utmost priority for an experienced teacher to train the mind of the students, and enable them to think critically and correctly. the most important question here is that how to develop such a crucial ability? this study examines a new way to the development of critical thinking utilizing critical discourse analytical tools. to attain this goal, two classes of senior english la...
In silico identification of epitopes from house cat and dog proteins as peptide immunotherapy candidates based on human leukocyte antigen binding affinity
The objective of this descriptive study was to determine Felis domesticus (cat) and Canis familiaris (dog) protein epitopes that bind strongly to selected HLA class II alleles to identify synthetic vaccine candidate epitopes and to identify individuals/populations who are likely to respond to vaccines. FASTA amino acid sequences of experimentally validated allergenic proteins of house cat and d...
full textdesigning unmanned aerial vehicle based on neuro-fuzzy systems
در این پایان نامه، کنترل نرو-فازی در پرنده هدایت پذیر از دور (پهپاد) استفاده شده است ابتدا در روش پیشنهادی اول، کنترل کننده نرو-فازی توسط مجموعه اطلاعات یک کنترل کننده pid به صورت off-line آموزش دیده است و در روش دوم یک کنترل کننده نرو-فازی on-line مبتنی بر شناسایی سیستم توسط شبکه عصبی rbf پیشنهاد شده است. سپس کاربرد این کنترل کننده در پهپاد بررسی شده است و مقایسه ای ما بین کنترل کننده های معمو...
My Resources
Journal title
volume 16 issue 6
pages 504- 517
publication date 2022-10
By following a journal you will be notified via email when a new issue of this journal is published.
Hosted on Doprax cloud platform doprax.com
copyright © 2015-2023